Welcome to Netbooks!

To login into Netbooks, enter your GitHub account details using the link on the right hand side. If you need assistance, please open an issue here.

You may also be interested in the Network Zoo package.

Useful Links

• Jupyter Notebook Documentation

• GitHub repository

• Citation: Ben Guebila, Weighill et al. An online notebook resource for reproducible inference, analysis and publication of gene regulatory networks. Nat. Methods (2022). DOI: 10.1038/s41592-022-01479-2

News

• v2.3.4 is out! We now define a kernel for each notebook, improving runtime and reproducibility, and to better manage conflicting dependencies between netbooks.

Courses using Netbooks

• 2024
• (Freiburg, Germany) Network biology workshop for the MeInBio Ph.D. program
• (HMS, USA) Center for Computational Biomedicine: Introduction to Gene Regulatory Network Inference – Getting More out of Your Data with NetZoo
• 2022-2023
• (HSPH, USA) EPI246: Applied Biomarkers in Cancer Epi
• 2022-2023
• (NCMM, Norway) Multi-omic data analysis and integration for precision medicine
• 2021-2023
• (HSPH, USA) BST280: Introductory Genomics & Bioinformatics for Health Research
• 2020
• (BU Academy, USA) STEM class

Funding

Funding, for equipment and development, provided by: