Welcome to Netbooks!

To login into Netbooks, enter your GitHub account details using the link on the right hand side. If you need assistance, please open an issue here.

You may also be interested in the Network Zoo package.

So far 157 researchers are using Netbooks.

Useful Links

• Jupyter Notebook Documentation

• GitHub repository

• Citation: Ben Guebila, Weighill et al. An online notebook resource for reproducible inference, analysis and publication of gene regulatory networks. Nat. Methods (2022). DOI: 10.1038/s41592-022-01479-2

News

• v2.5 is out! Each notebook now runs in its own environment, with netZooR 1.6.3 and netZooPy 0.10.6.
• v2.4.1 is out with a new pipeline available on our GitHub for replicating Netbooks as a server for your lab!

Courses using Netbooks

• 2024
• (Freiburg, Germany) Network biology workshop for the MeInBio Ph.D. program
• (HMS, USA) Center for Computational Biomedicine: Introduction to Gene Regulatory Network Inference – Getting More out of Your Data with NetZoo
• 2021-2023-2025
• (HSPH, USA) EPI246: Applied Biomarkers in Cancer Epi
• 2022-2023
• (NCMM, Norway) Multi-omic data analysis and integration for precision medicine
• 2021→2025
• (HSPH, USA) BST280: Introductory Genomics & Bioinformatics for Health Research
• 2020
• (BU Academy, USA) STEM class

Funding

Funding, for equipment and development, provided by: